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Add support for CSV formatted data
Presume CSV semantics for input.
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@ -16,6 +16,7 @@
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# limitations under the License.
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import argparse
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import csv
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import fcntl
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import io
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import numpy as np
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@ -73,7 +74,9 @@ def textplot(plotdata, bins):
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histogram = False
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aparser = argparse.ArgumentParser(description='Quick access to common statistics')
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aparser.add_argument('-c', type=int, default=0, help='Column number to analyze (default is last column)')
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aparser.add_argument('-s', default=False, action='store_true', help='Output histogram in sixel format')
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aparser.add_argument('-d', default=None, help='Value used to separate columns')
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aparser.add_argument('-x', default=False, action='store_true', help='Output histogram in sixel format')
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aparser.add_argument('-s', default=0, help='Number of header lines to skip before processing')
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aparser.add_argument('-g', default=False, action='store_true', help='Open histogram in separate graphical window')
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aparser.add_argument('-o', default=None, help='Output histogram to the specified filename in PNG format')
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aparser.add_argument('-t', default=False, action='store_true', help='Output a histogram in text format')
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@ -81,18 +84,35 @@ aparser.add_argument('-v', default=False, action='store_true', help='Attempt to
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aparser.add_argument('-b', type=int, default=10, help='Number of bins to use in histogram (default is 10)')
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args = aparser.parse_args(sys.argv[1:])
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plotdata = []
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data = sys.stdin.readline()
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headlines = int(args.s)
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while headlines >= 0:
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data = sys.stdin.readline()
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headlines -= 1
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if args.d:
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delimiter = args.d
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else:
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if '\t' in data:
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delimiter = '\t'
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elif ' ' in data:
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delimiter = ' '
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elif ',' in data:
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delimiter = ','
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else:
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delimiter = ' ' # handle single column
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data = list(csv.reader([data], delimiter=delimiter))[0]
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nodebydatum = {}
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idx = args.c - 1
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autoidx = False
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while data:
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node = None
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if ':' in data:
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node, data = data.split(':', 1)
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if idx == -1:
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if ':' in data[0]:
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node, data[0] = data[0].split(':', 1)
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else:
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node = data[0]
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if idx == -1 and not autoidx:
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while not autoidx:
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try:
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datum = float(data.split()[idx])
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datum = float(data[idx])
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except ValueError:
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idx -= 1
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continue
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@ -101,7 +121,7 @@ while data:
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sys.exit(1)
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autoidx = True
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else:
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datum = float(data.split()[idx])
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datum = float(data[idx])
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if node:
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if datum in nodebydatum:
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nodebydatum[datum].add(node)
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@ -109,8 +129,9 @@ while data:
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nodebydatum[datum] = set([node])
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plotdata.append(datum)
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data = sys.stdin.readline()
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data = list(csv.reader([data], delimiter=delimiter))[0]
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n = None
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if args.g or args.o or args.s:
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if args.g or args.o or args.x:
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n, bins = plot(args.g, args.o, plotdata, bins=args.b)
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if args.t:
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n, bins = textplot(plotdata, bins=args.b)
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